Purification, crystallization and preliminary structural studies of dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase (RmlC), the third enzyme of the dTDP-L-rhamnose synthesis pathway, from Salmonella enterica serovar typhimurium

Acta Crystallogr D Biol Crystallogr. 1999 Mar;55(Pt 3):706-8. doi: 10.1107/s0907444998015042.

Abstract

L-Rhamnose is an essential component of the cell wall of many pathogenic bacteria. Its precusor, dTDP-L-rhamnose, is synthesized from alpha-D-glucose-1-phosphate and dTTP via a pathway requiring four distinct enzymes: RmlA, RmlB, RmlC and RmlD. RmlC was overexpressed in Escherichia coli. The recombinant protein was purified by a two-step protocol involving anion-exchange and hydrophobic chromatography. Dynamic light-scattering experiments indicated that the recombinant protein is monodisperse. Crystals were obtained using the sitting-drop vapour-diffusion method with ammonium sulfate as precipitant. Diffraction data were collected on a frozen crystal to a resolution of 2.17 A. The crystal belongs to either space group P3121 or P3221, with unit-cell parameters a = b = 71.56, c = 183.53 A and alpha = beta = 90, gamma = 120 degrees.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbohydrate Epimerases / chemistry
  • Carbohydrate Epimerases / isolation & purification*
  • Chromatography, High Pressure Liquid
  • Cloning, Molecular
  • Crystallization
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / isolation & purification
  • Rhamnose / analogs & derivatives
  • Rhamnose / biosynthesis*
  • Salmonella typhimurium / enzymology*

Substances

  • Recombinant Proteins
  • Carbohydrate Epimerases
  • dTDP-4-ketorhamnose 3,5-epimerase
  • Rhamnose