Crystallization and preliminary crystallographic analysis of a D-aminoacylase from Alcaligenes faecalis DA1

Acta Crystallogr D Biol Crystallogr. 2002 Sep;58(Pt 9):1482-3. doi: 10.1107/S0907444902011046. Epub 2002 Aug 23.

Abstract

D-Aminoacylases catalyze the hydrolysis of N-acyl-D-amino acids into D-amino acids with the aid of zinc ions. The first D-aminoacylase crystal from Alcaligenes faecalis has been obtained in hanging drops at pH 5.6 by the vapour-diffusion method using 30% polyethylene glycol 4000 as precipitant. It belongs to space group P2(1)2(1)2(1), with unit-cell parameters a = 60.2, b = 76.6, c = 135.3 A. Reflections to 1.2 A resolution are observable. An initial atomic model with 472 residues has been built based on SeMet SAD data at 1.8 A resolution. Unexpectedly, the structure revealed a novel metal centre in the amidohydrolase superfamily.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alcaligenes / enzymology*
  • Amidohydrolases / chemistry*
  • Crystallization
  • Crystallography, X-Ray
  • Molecular Structure
  • Protein Conformation

Substances

  • Amidohydrolases
  • aminoacylase I