Antibody specific for the peptide.major histocompatibility complex. Is it T cell receptor-like?

J Biol Chem. 2004 Oct 22;279(43):44243-9. doi: 10.1074/jbc.M407021200. Epub 2004 Aug 9.

Abstract

Antibodies recognizing peptide bound to a major histocompatibility complex (MHC) protein usually have a higher affinity for the composite peptide.MHC (pMHC) ligand than T cell receptors (TCR) with the same specificity. Because the solvent-accessible peptide area constitutes only a small portion of the contacting pMHC surface, we hypothesized that the contribution of the MHC moiety to the TCR-pMHC complex stability is limited, ensuring a small increment of the binding energy delivered by the peptide to be distinguishable by the TCR or the peptide-specific antibody. This suggests that the gain in affinity of the antibody-pMHC interaction can be achieved through an increase in the on-rate without a significant change in the off-rate of the interaction. To test the hypothesis, we have analyzed the binding of an ovalbumin peptide (pOV8) and its variants associated with soluble H-2Kb protein to the 25-D1.16 monoclonal antibody and compared it with the binding of the same pMHC complexes to the OT-1 TCR. This comparison revealed a substantially higher on-rate of the antibody-pMHC interaction compared with the TCR-pMHC interaction. In contrast, both the antibody and the TCR-pMHC complexes exhibited comparably fast off-rates. Sequencing of the 25-D1.16 VH and VL genes showed that they have very few somatic mutations and those occur mainly in framework regions. We propose that the above features constitute a signature of the recognition of MHC-bound peptide antigens by TCR and TCR-like antibodies, which could explain why the latter are rarely produced in vivo.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antibodies / chemistry
  • Antibodies, Monoclonal / chemistry
  • Antibody Specificity
  • Base Sequence
  • Biosensing Techniques
  • Cloning, Molecular
  • DNA / chemistry
  • Edetic Acid / chemistry
  • Hybridomas / metabolism
  • Immunoglobulin Fragments
  • Kinetics
  • Major Histocompatibility Complex
  • Mice
  • Molecular Sequence Data
  • Mutation
  • Ovalbumin / chemistry
  • Peptides / chemistry*
  • Plasmids / metabolism
  • Protein Binding
  • Protein Structure, Tertiary
  • Receptors, Antigen, T-Cell / chemistry*
  • Receptors, Antigen, T-Cell / immunology*
  • Receptors, Antigen, T-Cell / metabolism
  • Thermodynamics
  • Time Factors
  • Transfection

Substances

  • Antibodies
  • Antibodies, Monoclonal
  • Immunoglobulin Fragments
  • Peptides
  • Receptors, Antigen, T-Cell
  • Ovalbumin
  • DNA
  • Edetic Acid

Associated data

  • GENBANK/AY704179
  • GENBANK/AY704180