Heterologous RNA encapsidated in Pariacoto virus-like particles forms a dodecahedral cage similar to genomic RNA in wild-type virions

J Virol. 2004 Oct;78(20):11371-8. doi: 10.1128/JVI.78.20.11371-11378.2004.

Abstract

The genome of some icosahedral RNA viruses plays an essential role in capsid assembly and structure. In T=3 particles of the nodavirus Pariacoto virus (PaV), a remarkable 35% of the single-stranded RNA genome is icosahedrally ordered. This ordered RNA can be visualized at high resolution by X-ray crystallography as a dodecahedral cage consisting of 30 24-nucleotide A-form RNA duplex segments that each underlie a twofold icosahedral axis of the virus particle and interact extensively with the basic N-terminal region of 60 subunits of the capsid protein. To examine whether the PaV genome is a specific determinant of the RNA structure, we produced virus-like particles (VLPs) by expressing the wild-type capsid protein open reading frame from a recombinant baculovirus. VLPs produced by this system encapsidated similar total amounts of RNA as authentic virus particles, but only about 6% of this RNA was PaV specific, the rest being of cellular or baculovirus origin. Examination of the VLPs by electron cryomicroscopy and image reconstruction at 15.4-A resolution showed that the encapsidated RNA formed a dodecahedral cage similar to that of wild-type particles. These results demonstrate that the specific nucleotide sequence of the PaV genome is not required to form the dodecahedral cage of ordered RNA.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Baculoviridae / genetics
  • Baculoviridae / metabolism
  • Capsid Proteins / metabolism
  • Cells, Cultured
  • Cryoelectron Microscopy
  • Crystallography, X-Ray
  • Genome, Viral*
  • Molecular Structure
  • Nodaviridae / genetics*
  • Nodaviridae / metabolism
  • RNA, Viral / analysis
  • RNA, Viral / chemistry*
  • RNA, Viral / genetics
  • Recombination, Genetic
  • Spodoptera
  • Virion / metabolism*

Substances

  • Capsid Proteins
  • RNA, Viral