Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes

Proc Natl Acad Sci U S A. 2005 Jan 25;102(4):1017-22. doi: 10.1073/pnas.0409275102. Epub 2005 Jan 18.

Abstract

Uridine insertion/deletion RNA editing in trypanosomatid mitochondria is a posttranscriptional RNA modification phenomenon required for translation of mitochondrial mRNAs. This process involves guide RNA-mediated cleavage at a specific site, insertion or deletion of Us from the 3' end of the 5' mRNA fragment, and ligation of the two mRNA fragments. The Leishmania major RNA ligase-containing complex protein 2 expressed in insect cells has a 3'-5' exoribonuclease activity and was therefore renamed RNA editing exonuclease 1 (REX1). Recombinant REX1 specifically trims 3' overhanging Us and stops at a duplex region. Evidence is presented that REX1 is responsible for deletion of the 3' overhanging Us from the bridged mRNA 5' cleavage fragment and that RNA editing ligase 1 is responsible for the ligation of the two mRNA cleavage fragments in U-deletion editing. The evidence involves both in vivo down-regulation of REX1 expression in Trypanosoma brucei by RNA interference and the reconstitution of precleaved U-deletion in vitro editing with only two recombinant enzymes: recombinant REX1 and recombinant RNA editing ligase 1.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Carbon-Oxygen Ligases / physiology*
  • Mitochondrial Proteins / physiology*
  • RNA Editing*
  • Recombinant Proteins / pharmacology
  • Trypanosoma brucei brucei / genetics*
  • Uridine / metabolism*

Substances

  • Mitochondrial Proteins
  • Recombinant Proteins
  • Carbon-Oxygen Ligases
  • REL1 RNA ligase, Trypanosoma brucei
  • REL2 RNA ligase, Trypanosoma brucei
  • Uridine