Pulse ENDOR and density functional theory on the peridinin triplet state involved in the photo-protective mechanism in the peridinin-chlorophyll a-protein from Amphidinium carterae

Biochim Biophys Acta. 2008 Mar;1777(3):295-307. doi: 10.1016/j.bbabio.2007.12.003. Epub 2008 Jan 17.

Abstract

The photoexcited triplet state of the carotenoid peridinin in the Peridinin-chlorophyll a-protein of the dinoflagellate Amphidinium carterae has been investigated by pulse EPR and pulse ENDOR spectroscopies at variable temperatures. This is the first time that the ENDOR spectra of a carotenoid triplet in a naturally occurring light-harvesting complex, populated by energy transfer from the chlorophyll a triplet state, have been reported. From the electron spin echo experiments we have obtained the information on the electron spin polarization dynamics and from Mims ENDOR experiments we have derived the triplet state hyperfine couplings of the alpha- and beta-protons of the peridinin conjugated chain. Assignments of beta-protons belonging to two different methyl groups, with aiso=7.0 MHz and aiso=10.6 MHz respectively, have been made by comparison with the values predicted from density functional theory. Calculations provide a complete picture of the triplet spin density on the peridinin molecule, showing that the triplet spins are delocalized over the whole pi-conjugated system with an alternate pattern, which is lost in the central region of the polyene chain. The ENDOR investigation strongly supports the hypothesis of localization of the triplet state on one peridinin in each subcluster of the PCP complex, as proposed in [Di Valentin et al. Biochim. Biophys. Acta 1777 (2008) 186-195]. High spin density has been found specifically at the carbon atom at position 12 (see Fig. 1B), which for the peridinin involved in the photo-protective mechanism is in close contact with the water ligand to the chlorophyll a pigment. We suggest that this ligated water molecule, placed at the interface between the chlorophyll-peridinin pair, is functioning as a bridge in the triplet-triplet energy transfer between the two pigments.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Carotenoids / chemistry*
  • Carotenoids / metabolism
  • Carotenoids / radiation effects
  • Computer Simulation
  • Dinoflagellida / chemistry*
  • Dinoflagellida / metabolism
  • Dinoflagellida / radiation effects
  • Electron Spin Resonance Spectroscopy*
  • Kinetics
  • Models, Chemical*
  • Molecular Structure
  • Oxygen / metabolism
  • Photosynthesis*
  • Protein Conformation
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / metabolism
  • Protozoan Proteins / radiation effects
  • Quantum Theory
  • Temperature
  • Water / metabolism

Substances

  • Protozoan Proteins
  • peridinin chlorophyll-a protein, Dinophyceae
  • Water
  • Carotenoids
  • Oxygen