[Specific interaction of a nuclear protein factor from the CTF/NF-I family with 2 different promoter regions of the rat tyrosine aminotransferase gene]

Mol Biol (Mosk). 1989 Sep-Oct;23(5):1400-15.
[Article in Russian]

Abstract

Using gel-retardation and DNase I footprinting assays, we have analysed sequence-specific DNA-protein interactions within proximal promoter fragment (from -2 to -210 bp relative to the transcription start) of the rat tyrosine aminotransferase (TAT) gene. Two distinct DNase I protection regions flanked at either boundary by sites of DNase I hypersensitivity were observed with the rat-liver nuclear extracts. The internal sequence of the region I non-coding strand, (-155)TGGGCCACCTTCCAAT(-170), is highly homologous to the NF-I consensus sequence TGG(N)6-7TGCCAA and also shares a CCAAT-box; the region II noncoding strand sequence includes asymmetrically positioned (-37)AGCCAAT(-43) recognition motif. Since there have been a number of reports about multiple DNA-binding factors that recognize CCAAT homologies, both regions were likely to interact with either a single or distinct factors. Here we show that both region I and II of the TAT gene promoter are binding to the same factor related to the human CTF/NF-I. The evidence for that is based on competition experiments using the DNA fragment containing a synthetic consensus sequence for the NF-I recognition site and on the indistinguishable chromatographic properties of the activity specifically binding to each of three DNA fragments containing NF-I consensus, region I and region II sequences.

Publication types

  • English Abstract

MeSH terms

  • Animals
  • Base Sequence
  • CCAAT-Enhancer-Binding Proteins*
  • DNA-Binding Proteins / genetics*
  • DNA-Binding Proteins / metabolism
  • Deoxyribonuclease I
  • Male
  • Molecular Sequence Data
  • NFI Transcription Factors
  • Nuclear Proteins
  • Nucleotide Mapping
  • Promoter Regions, Genetic*
  • Rats
  • Rats, Inbred Strains
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism
  • Tyrosine Transaminase / genetics*
  • Y-Box-Binding Protein 1

Substances

  • CCAAT-Enhancer-Binding Proteins
  • DNA-Binding Proteins
  • NFI Transcription Factors
  • Nfic protein, rat
  • Nuclear Proteins
  • Transcription Factors
  • Y-Box-Binding Protein 1
  • YBX1 protein, human
  • Tyrosine Transaminase
  • Deoxyribonuclease I