Selective Detection of Protein Homologues in Serum Using an OmpG Nanopore

Anal Chem. 2015 Nov 3;87(21):11143-9. doi: 10.1021/acs.analchem.5b03350. Epub 2015 Oct 23.

Abstract

Outer membrane protein G is a monomeric β-barrel porin that has seven flexible loops on its extracellular side. Conformational changes of these labile loops induce gating spikes in current recordings that we exploited as the prime sensing element for protein detection. The gating characteristics, open probability, frequency, and current decrease, provide rich information for analyte identification. Here, we show that two antibiotin antibodies each induced a distinct gating pattern, which allowed them to be readily detected and simultaneously discriminated by a single OmpG nanopore in the presence of fetal bovine serum. Our results demonstrate the feasibility of directly profiling proteins in real-world samples with minimal or no sample pretreatment.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Outer Membrane Proteins / chemistry*
  • Blood Proteins / analysis*
  • Escherichia coli Proteins / chemistry*
  • Nanopores*
  • Porins / chemistry*

Substances

  • Bacterial Outer Membrane Proteins
  • Blood Proteins
  • Escherichia coli Proteins
  • OmpG protein, E coli
  • Porins