The VPS34 PI3K negatively regulates RAB-5 during endosome maturation

J Cell Sci. 2017 Jun 15;130(12):2007-2017. doi: 10.1242/jcs.194746. Epub 2017 Apr 28.

Abstract

The GTPase Rab5 and phosphatidylinositol-3 phosphate [PI(3)P] coordinately regulate endosome trafficking. Rab5 recruits Vps34, the class III phosphoinositide 3-kinase (PI3K), to generate PI(3)P and recruit PI(3)P-binding proteins. Loss of Rab5 and loss of Vps34 have opposite effects on endosome size, suggesting that our understanding of how Rab5 and PI(3)P cooperate is incomplete. Here, we report a novel regulatory loop whereby Caenorhabditis elegans VPS-34 inactivates RAB-5 via recruitment of the TBC-2 Rab GTPase-activating protein. We found that loss of VPS-34 caused a phenotype with large late endosomes, as with loss of TBC-2, and that Rab5 activity (mice have two Rab5 isoforms, Rab5a and Rab5b) is increased in Vps34-knockout mouse embryonic fibroblasts (Vps34 is also known as PIK3C3 in mammals). We found that VPS-34 is required for TBC-2 endosome localization and that the pleckstrin homology (PH) domain of TBC-2 bound PI(3)P. Deletion of the PH domain enhanced TBC-2 localization to endosomes in a VPS-34-dependent manner. Thus, PI(3)P binding of the PH domain might be permissive for another PI(3)P-regulated interaction that recruits TBC-2 to endosomes. Therefore, VPS-34 recruits TBC-2 to endosomes to inactivate RAB-5 to ensure the directionality of endosome maturation.

Keywords: Caenorhabditis elegans; Endosome; Phosphatidylinositide-3 phosphate; Rab GTPase; TBC-2; Vps34.

MeSH terms

  • Animals
  • Animals, Genetically Modified
  • Caenorhabditis elegans
  • Caenorhabditis elegans Proteins / metabolism*
  • Cell Membrane / metabolism
  • Class III Phosphatidylinositol 3-Kinases / metabolism*
  • Endosomes / metabolism*
  • Fibroblasts / metabolism
  • GTPase-Activating Proteins / metabolism*
  • Green Fluorescent Proteins / metabolism
  • Liposomes / chemistry
  • Mice
  • Mice, Knockout
  • Mutation
  • Phenotype
  • Plasmids / metabolism
  • Protein Domains
  • RNA Interference
  • rab5 GTP-Binding Proteins / metabolism*

Substances

  • Caenorhabditis elegans Proteins
  • GTPase-Activating Proteins
  • Liposomes
  • TBC-2 protein, C elegans
  • Green Fluorescent Proteins
  • Class III Phosphatidylinositol 3-Kinases
  • rab5 GTP-Binding Proteins