Machine learning: a useful radiological adjunct in determination of a newly diagnosed glioma's grade and IDH status

J Neurooncol. 2018 Sep;139(2):491-499. doi: 10.1007/s11060-018-2895-4. Epub 2018 May 16.

Abstract

Introduction: Machine learning methods have been introduced as a computer aided diagnostic tool, with applications to glioma characterisation on MRI. Such an algorithmic approach may provide a useful adjunct for a rapid and accurate diagnosis of a glioma. The aim of this study is to devise a machine learning algorithm that may be used by radiologists in routine practice to aid diagnosis of both: WHO grade and IDH mutation status in de novo gliomas.

Methods: To evaluate the status quo, we interrogated the accuracy of neuroradiology reports in relation to WHO grade: grade II 96.49% (95% confidence intervals [CI] 0.88, 0.99); III 36.51% (95% CI 0.24, 0.50); IV 72.9% (95% CI 0.67, 0.78). We derived five MRI parameters from the same diagnostic brain scans, in under two minutes per case, and then supplied these data to a random forest algorithm.

Results: Machine learning resulted in a high level of accuracy in prediction of tumour grade: grade II/III; area under the receiver operating characteristic curve (AUC) = 98%, sensitivity = 0.82, specificity = 0.94; grade II/IV; AUC = 100%, sensitivity = 1.0, specificity = 1.0; grade III/IV; AUC = 97%, sensitivity = 0.83, specificity = 0.97. Furthermore, machine learning also facilitated the discrimination of IDH status: AUC of 88%, sensitivity = 0.81, specificity = 0.77.

Conclusions: These data demonstrate the ability of machine learning to accurately classify diffuse gliomas by both WHO grade and IDH status from routine MRI alone-without significant image processing, which may facilitate usage as a diagnostic adjunct in clinical practice.

Keywords: Diagnostic accuracy; Glioma; MRI; Machine learning; Random forest.

MeSH terms

  • Adult
  • Aged
  • Algorithms
  • Brain Neoplasms / diagnostic imaging
  • Brain Neoplasms / genetics
  • Brain Neoplasms / pathology
  • Female
  • Follow-Up Studies
  • Glioma / diagnostic imaging
  • Glioma / genetics*
  • Glioma / pathology*
  • Humans
  • Image Processing, Computer-Assisted / methods*
  • Isocitrate Dehydrogenase / genetics*
  • Machine Learning*
  • Magnetic Resonance Imaging / methods*
  • Male
  • Middle Aged
  • Mutation*
  • Neoplasm Grading
  • ROC Curve
  • Retrospective Studies

Substances

  • Isocitrate Dehydrogenase
  • IDH1 protein, human