Oxygenation reactions catalyzed by the F557V mutant of soybean lipoxygenase-1: Evidence for two orientations of substrate binding

Arch Biochem Biophys. 2019 Oct 15:674:108082. doi: 10.1016/j.abb.2019.108082. Epub 2019 Aug 29.

Abstract

Plant lipoxygenases oxygenate linoleic acid to produce 13(S)-hydroperoxy-9Z,11E-octadecadienoic acid (13(S)-HPOD) or 9-hydroperoxy-10E,12Z-octadecadienoic acid (9(S)-HPOD). The manner in which these enzymes bind substrates and the mechanisms by which they control regiospecificity are uncertain. Hornung et al. (Proc. Natl. Acad. Sci. USA96 (1999) 4192-4197) have identified an important residue, corresponding to phe-557 in soybean lipoxygenase-1 (SBLO-1). These authors proposed that large residues in this position favored binding of linoleate with the carboxylate group near the surface of the enzyme (tail-first binding), resulting in formation of 13(S)-HPOD. They also proposed that smaller residues in this position facilitate binding of linoleate in a head-first manner with its carboxylate group interacting with a conserved arginine residue (arg-707 in SBLO-1), which leads to 9(S)-HPOD. In the present work, we have tested these proposals on SBLO-1. The F557V mutant produced 33% 9-HPOD (S:R = 87:13) from linoleic acid at pH 7.5, compared with 8% for the wild-type enzyme and 12% with the F557V,R707L double mutant. Experiments with 11(S)-deuteriolinoleic acid indicated that the 9(S)-HPOD produced by the F557V mutant involves removal of hydrogen from the pro-R position on C-11 of linoleic acid, as expected if 9(S)-HPOD results from binding in an orientation that is inverted relative to that leading to 13(S)-HPOD. The product distributions obtained by oxygenation of 10Z,13Z-nonadecadienoic acid and arachidonic acid by the F557V mutant support the hypothesis that ω6 oxygenation results from tail-first binding and ω10 oxygenation from head-first binding. The results demonstrate that the regiospecificity of SBLO-1 can be altered by a mutation that facilitates an alternative mode of substrate binding and adds to the body of evidence that 13(S)-HPOD arises from tail-first binding.

Keywords: Lipoxygenase; Mutagenesis; Regioselectivity; Stereoselectivity; Substrate binding.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Binding Sites
  • Catalysis
  • Deuterium / chemistry
  • Fatty Acids, Unsaturated / chemistry
  • Fatty Acids, Unsaturated / metabolism*
  • Glycine max / enzymology*
  • Linoleic Acids / chemistry
  • Lipid Peroxides / chemistry
  • Lipoxygenase / genetics
  • Lipoxygenase / metabolism*
  • Mutation
  • Oxidation-Reduction
  • Phosphatidylcholines / chemistry
  • Protein Binding
  • Stereoisomerism

Substances

  • Fatty Acids, Unsaturated
  • Linoleic Acids
  • Lipid Peroxides
  • Phosphatidylcholines
  • 13-hydroperoxy-9,11-octadecadienoic acid
  • 9-hydroperoxy-11,12-octadecadienoic acid
  • 1-palmitoyl-2-linoleoylphosphatidylcholine
  • Deuterium
  • Lipoxygenase