Arginine in C9ORF72 Dipolypeptides Mediates Promiscuous Proteome Binding and Multiple Modes of Toxicity

Mol Cell Proteomics. 2020 Apr;19(4):640-654. doi: 10.1074/mcp.RA119.001888. Epub 2020 Feb 21.

Abstract

C9ORF72-associated Motor Neuron Disease patients feature abnormal expression of 5 dipeptide repeat (DPR) polymers. Here we used quantitative proteomics in a mouse neuronal-like cell line (Neuro2a) to demonstrate that the Arg residues in the most toxic DPRS, PR and GR, leads to a promiscuous binding to the proteome compared with a relative sparse binding of the more inert AP and GA. Notable targets included ribosomal proteins, translation initiation factors and translation elongation factors. PR and GR comprising more than 10 repeats appeared to robustly stall on ribosomes during translation suggesting Arg-rich peptide domains can electrostatically jam the ribosome exit tunnel during synthesis. Poly-GR also recruited arginine methylases, induced hypomethylation of endogenous proteins, and induced a profound destabilization of the actin cytoskeleton. Our findings point to arginine in GR and PR polymers as multivalent toxins to translation as well as arginine methylation that may explain the dysfunction of biological processes including ribosome biogenesis, mRNA splicing and cytoskeleton assembly.

Keywords: Neurodegenerative diseases; RAN-translation; amyotrophic lateral sclerosis (ALS); methylation; methylosome; molecular biology; networks; protein aggregation; protein identification; protein-protein interactions; proteotoxicity; translation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actin Cytoskeleton / drug effects
  • Actin Cytoskeleton / metabolism
  • Animals
  • Arginine / metabolism*
  • Arginine / toxicity*
  • C9orf72 Protein / metabolism*
  • Green Fluorescent Proteins / metabolism
  • HEK293 Cells
  • Humans
  • Methylation / drug effects
  • Mice
  • Models, Biological
  • Peptides / metabolism*
  • Protein Binding / drug effects
  • Protein Biosynthesis / drug effects
  • Proteome / metabolism*
  • Ribosomes / metabolism

Substances

  • C9orf72 Protein
  • Peptides
  • Proteome
  • Green Fluorescent Proteins
  • Arginine