ADR-2 regulates fertility and oocyte fate in Caenorhabditis elegans

Genetics. 2024 Oct 7;228(2):iyae114. doi: 10.1093/genetics/iyae114.

Abstract

RNA-binding proteins (RBPs) play essential roles in coordinating germline gene expression and development in all organisms. Here, we report that loss of ADR-2, a member of the adenosine deaminase acting on RNA family of RBPs and the sole adenosine-to-inosine RNA-editing enzyme in Caenorhabditis elegans, can improve fertility in multiple genetic backgrounds. First, we show that loss of RNA editing by ADR-2 restores normal embryo production to subfertile animals that transgenically express a vitellogenin (yolk protein) fusion to green fluorescent protein. Using this phenotype, a high-throughput screen was designed to identify RBPs that when depleted yield synthetic phenotypes with loss of adr-2. The screen uncovered a genetic interaction between ADR-2 and SQD-1, a member of the heterogeneous nuclear ribonucleoprotein family of RBPs. Microscopy, reproductive assays, and high-throughput sequencing reveal that sqd-1 is essential for the onset of oogenesis and oogenic gene expression in young adult animals and that loss of adr-2 can counteract the effects of loss of sqd-1 on gene expression and rescue the switch from spermatogenesis to oogenesis. Together, these data demonstrate that ADR-2 can contribute to the suppression of fertility and suggest novel roles for both RNA editing-dependent and RNA editing-independent mechanisms in regulating embryogenesis.

Keywords: ADAR; RNA editing; dsRBP; germline; hnRNP; inosine; oogenesis.

MeSH terms

  • Adenosine Deaminase / genetics
  • Adenosine Deaminase / metabolism
  • Animals
  • Caenorhabditis elegans Proteins* / genetics
  • Caenorhabditis elegans Proteins* / metabolism
  • Caenorhabditis elegans* / genetics
  • Caenorhabditis elegans* / metabolism
  • Female
  • Fertility* / genetics
  • Male
  • Oocytes* / metabolism
  • Oogenesis / genetics
  • RNA Editing
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism
  • Spermatogenesis / genetics

Substances

  • Caenorhabditis elegans Proteins
  • Adr-2 protein, C elegans
  • Adenosine Deaminase
  • RNA-Binding Proteins