N-degron pathways

Proc Natl Acad Sci U S A. 2024 Sep 24;121(39):e2408697121. doi: 10.1073/pnas.2408697121. Epub 2024 Sep 12.

Abstract

An N-degron is a degradation signal whose main determinant is a "destabilizing" N-terminal residue of a protein. Specific N-degrons, discovered in 1986, were the first identified degradation signals in short-lived intracellular proteins. These N-degrons are recognized by a ubiquitin-dependent proteolytic system called the Arg/N-degron pathway. Although bacteria lack the ubiquitin system, they also have N-degron pathways. Studies after 1986 have shown that all 20 amino acids of the genetic code can act, in specific sequence contexts, as destabilizing N-terminal residues. Eukaryotic proteins are targeted for the conditional or constitutive degradation by at least five N-degron systems that differ both functionally and mechanistically: the Arg/N-degron pathway, the Ac/N-degron pathway, the Pro/N-degron pathway, the fMet/N-degron pathway, and the newly named, in this perspective, GASTC/N-degron pathway (GASTC = Gly, Ala, Ser, Thr, Cys). I discuss these systems and the expanded terminology that now encompasses the entire gamut of known N-degron pathways.

Keywords: N-terminal; degron; proteasome; proteolysis; ubiquitin.

Publication types

  • Review

MeSH terms

  • Animals
  • Degrons
  • Humans
  • Proteins / chemistry
  • Proteins / genetics
  • Proteins / metabolism
  • Proteolysis*
  • Signal Transduction
  • Ubiquitin / metabolism

Substances

  • Ubiquitin
  • Proteins