Recent Advances in Mass Spectrometry-Based Bottom-Up Proteomics

Anal Chem. 2025 Mar 11;97(9):4728-4749. doi: 10.1021/acs.analchem.4c06750. Epub 2025 Feb 25.

Abstract

Mass spectrometry-based proteomics is about 35 years old, and recent progress appears to be speeding up across all subfields. In this review, we focus on advances over the last two years in select areas within bottom-up proteomics, including approaches to high-throughput experiments, data analysis using machine learning, drug discovery, glycoproteomics, extracellular vesicle proteomics, and structural proteomics.

Publication types

  • Review

MeSH terms

  • Drug Discovery
  • Extracellular Vesicles / chemistry
  • Extracellular Vesicles / metabolism
  • Humans
  • Machine Learning
  • Mass Spectrometry* / methods
  • Proteomics* / methods