Transcriptional landscapes underlying Notch-induced lineage conversion and plasticity of mammary basal cells

EMBO J. 2025 May;44(10):2827-2855. doi: 10.1038/s44318-025-00424-1. Epub 2025 Apr 4.

Abstract

The mammary epithelium derives from multipotent mammary stem cells (MaSCs) that engage into differentiation during embryonic development. However, adult MaSCs maintain the ability to reactivate multipotency in non-physiological contexts. We previously reported that Notch1 activation in committed basal cells triggers a basal-to-luminal cell fate switch in the mouse mammary gland. Here, we report conservation of this mechanism and found that in addition to the mammary gland, constitutive Notch1 signaling induces a basal-to-luminal cell fate switch in adult cells of the lacrimal gland, the salivary gland, and the prostate. Since the lineage transition is progressive in time, we performed single-cell transcriptomic analysis on index-sorted mammary cells at different stages of lineage conversion, generating a temporal map of changes in cell identity. Combining single-cell analyses with organoid assays, we demonstrate that cell proliferation is indispensable for this lineage conversion. We also reveal the individual transcriptional landscapes underlying the cellular plasticity switching of committed mammary cells in vivo with spatial and temporal resolution. Given the roles of Notch signaling in cancer, these results may help to better understand the mechanisms that drive cellular transformation.

Keywords: Epithelial Stem Cells; Lineage Conversion; Notch1 Signaling; Plasticity.

MeSH terms

  • Animals
  • Cell Differentiation
  • Cell Lineage*
  • Cell Plasticity*
  • Cell Proliferation
  • Epithelial Cells / cytology
  • Epithelial Cells / metabolism
  • Female
  • Mammary Glands, Animal* / cytology
  • Mammary Glands, Animal* / metabolism
  • Mice
  • Receptor, Notch1* / genetics
  • Receptor, Notch1* / metabolism
  • Signal Transduction
  • Single-Cell Analysis
  • Transcriptome

Substances

  • Receptor, Notch1
  • Notch1 protein, mouse