Emergence and spread of ST5 methicillin-resistant Staphylococcus aureus with accessory gene regulator dysfunction: genomic insights and antibiotic resistance

Microbiol Res. 2025 Aug:297:128196. doi: 10.1016/j.micres.2025.128196. Epub 2025 Apr 25.

Abstract

The globally disseminated Staphylococcus aureus ST5 clone poses a major public health threat due to its multidrug resistance and virulence. Here, we identified an agr-dysfunctional (agrA-I238K) ST5 MRSA clone that has spread across East and Southeast Asia, with recent increases in China since its emergence in the 1970s. Comparative genomic analyses identified distinct single-nucleotide polymorphisms and mobile genetic elements linked to enhanced resistance and virulence. This clone exhibits resistance to seven antimicrobial classes, including third-generation tetracyclines and fusidic acid, and shares phenotypic and genetic similarities with the vancomycin-intermediate S. aureus Mu50 strain, including reduced susceptibility to vancomycin, teicoplanin, and daptomycin. The agrA-I238K mutation attenuates hemolytic activity, increases biofilm formation, and reduces daptomycin susceptibility, suggesting a key role in the clone's success. Our results demonstrate the important role of agrA-I238K mutation in the widespread distribution of agr-dysfunctional MRSA and highlight the importance of genomic surveillance in tracking the spread of agr-dysfunctional ST5 MRSA.

Keywords: Accessory gene regulator dysfunction; Antibiotic resistance; Genomic surveillance; ST5 methicillin-resistant Staphylococcus aureus; agrA-I238K.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins* / genetics
  • Biofilms / growth & development
  • China / epidemiology
  • Drug Resistance, Multiple, Bacterial* / genetics
  • Genome, Bacterial
  • Genomics
  • Humans
  • Interspersed Repetitive Sequences
  • Methicillin-Resistant Staphylococcus aureus* / drug effects
  • Methicillin-Resistant Staphylococcus aureus* / genetics
  • Methicillin-Resistant Staphylococcus aureus* / isolation & purification
  • Methicillin-Resistant Staphylococcus aureus* / pathogenicity
  • Microbial Sensitivity Tests
  • Mutation
  • Polymorphism, Single Nucleotide
  • Staphylococcal Infections* / epidemiology
  • Staphylococcal Infections* / microbiology
  • Trans-Activators* / genetics
  • Virulence / genetics

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Trans-Activators
  • Agr protein, Staphylococcus aureus