RNA In Situ Hybridization to Visualize Tick-Borne Viruses

Methods Mol Biol. 2025:2936:99-109. doi: 10.1007/978-1-0716-4587-1_11.

Abstract

Visualization of tissue and cellular architecture is essential for understanding the pathobiology of tick-borne virus infection. RNA in situ hybridization (ISH) utilizes specific oligonucleotide probes to detect the presence and specific location of complementary RNA transcript targets within a tissue section. Chromogenic or fluorescent staining technologies allow researchers to visualize multiple RNA targets within a single tissue. Herein, we describe an RNA ISH methodology based on a commercially available kit to hybridize specific probes to POWV RNA within infected tissues.

Keywords: Brain; Histology; POWV; RNA in situ hybridization.

MeSH terms

  • Animals
  • Encephalitis Viruses, Tick-Borne* / genetics
  • Encephalitis Viruses, Tick-Borne* / isolation & purification
  • In Situ Hybridization* / methods
  • RNA, Viral* / genetics
  • Ticks* / virology

Substances

  • RNA, Viral