Efficient mining of natural products from Mangrove streptomyces using NP-PRESS

Arch Microbiol. 2025 Jun 21;207(8):182. doi: 10.1007/s00203-025-04380-6.

Abstract

Streptomyces-derived natural products are an important source of lead compounds for drug discovery. Traditional methods for mining these compounds are costly, time-consuming, and labor-intensive. To address these challenges, we applied NP-PRESS, a two-stage metabolome refining pipeline, to Streptomyces speibonae W307, isolated from a mangrove environment. We conducted a thorough analysis of molecular features using NP-PRESS, leading to the identification of three natural products named strepyrazinones A, B, and C, two of which possess new structures. These compounds were characterized using high-resolution MS and NMR, with their configurations determined through ECD calculations. Additionally, we proposed their corresponding biosynthetic gene cluster and putative biosynthetic pathways.

Keywords: S. speibonae W307; Mangrove; NP-PRESS; Strepyrazinones.

MeSH terms

  • Biological Products* / chemistry
  • Biological Products* / isolation & purification
  • Biological Products* / metabolism
  • Biosynthetic Pathways / genetics
  • Magnetic Resonance Spectroscopy
  • Metabolome
  • Molecular Structure
  • Multigene Family
  • Streptomyces* / chemistry
  • Streptomyces* / genetics
  • Streptomyces* / isolation & purification
  • Streptomyces* / metabolism

Substances

  • Biological Products