The Impact of Gut Microbiota on Chronic Obstructive Pulmonary Disease: A Dual-Sample Mendelian Randomization Study

Int J Chron Obstruct Pulmon Dis. 2025 Jun 17:20:1983-1993. doi: 10.2147/COPD.S511383. eCollection 2025.

Abstract

Background: Chronic Obstructive Pulmonary Disease (COPD) is a major cause of global mortality and disability. Previous research suggests a relationship between gut microbiota and COPD, yet the causal link remains unclear. Hence, we conducted a dual-sample Mendelian randomization study to elucidate the impact of gut microbiota on COPD.

Methods: We utilized single-nucleotide polymorphisms (SNPs) as instrumental variables, and the Inverse Variance Weighted (IVW) method for primary analysis. We explored the causal linkage between gut microbiota species (Coprococcus2, Holdemanella, Allisonella, Anaerostipes, Lachnospiraceae UCG008, Lachnospiraceae UCG010, Prevotella9, Marvinbryantia, Ruminococcaceae UCG013) and COPD through the analysis of genome-wide association study (GWAS) data sourced from a Finnish database. Summary data for COPD (6,915 cases and 186,723 controls), Early onset COPD (3,508 cases and 212,197 controls), admission rate of COPD (9,113 cases and 212,292 controls), related infection of COPD (59,925 cases and 159,867 controls), respiratory dysfunction of COPD (1,031 cases and 186,723 controls), were from FinnGen consortium R7 GWAS.

Result: Our analysis revealed statistically significant correlations between several genera and COPD. Coprococcus2 exhibits a consistent protective role throughout the progression of COPD, evident in both typical COPD [OR=0.750, 95% CI (0.601-0.937)], early-onset cases [OR=0.686, 95% CI (0.511-0.920)], COPD-related hospitalizations [OR=0.724, 95% CI (0.575-0.910)] and infections [OR=0.301, 95% CI (0.094-0.961)]. Holdemanella manifests as a consistent risk factor in the COPD incidence [OR=1.211, 95% CI (1.063-1.380)], early-onset COPD [OR=1.214, 95% CI (1.019-1.446)], COPD hospitalization [OR=1.225, 95% CI (1.072-1.401)] and respiratory impairment (OR:1.645, 95% CI: 1.198-2.258). Allisonella demonstrates protective attributes in COPD occurrence [OR=0.884, 95% CI (0.794-0.984)]. Genera such as Anaerostipes, Lachnospiraceae UCG008, Lachnospiraceae UCG010, and Prevotella9 show protective effects specifically in early-onset COPD. Marvinbryantia and Ruminococcaceae UCG013 are consistently identified as risk factors in onset of typical COPD.

Conclusion: Mendelian randomization studies confirm a causal link between gut microbiota and various COPD types and complications, offering new insights into the disease's pathogenesis, prevention, and treatment.

Keywords: Mendelian randomization analysis; chronic obstructive pulmonary disease; gut microbiota; gut–lung axis.

MeSH terms

  • Aged
  • Bacteria* / classification
  • Bacteria* / genetics
  • Female
  • Finland / epidemiology
  • Gastrointestinal Microbiome* / genetics
  • Genetic Predisposition to Disease
  • Genome-Wide Association Study
  • Humans
  • Lung* / microbiology
  • Lung* / physiopathology
  • Male
  • Mendelian Randomization Analysis
  • Middle Aged
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Pulmonary Disease, Chronic Obstructive* / diagnosis
  • Pulmonary Disease, Chronic Obstructive* / epidemiology
  • Pulmonary Disease, Chronic Obstructive* / genetics
  • Pulmonary Disease, Chronic Obstructive* / microbiology
  • Pulmonary Disease, Chronic Obstructive* / physiopathology
  • Risk Assessment
  • Risk Factors