Single-neuron projectomes of macaque prefrontal cortex reveal refined axon targeting and arborization

Cell. 2025 Jul 10;188(14):3806-3822.e24. doi: 10.1016/j.cell.2025.06.005.

Abstract

Cortical expansion endows advanced cognitive functions in primates, and whole-brain single-neuron projection analysis helps to elucidate underlying neural circuit mechanisms. Here, we reconstructed 2,231 single-neuron projectomes for the macaque prefrontal cortex (PFC) and identified 32 projectome-based subtypes of intra-telencephalic, pyramidal-tract, and cortico-thalamic neurons. Each subtype exhibited distinct topography in their soma distribution within the PFC, a characteristic pattern of axon targeting, and subregion-specific patchy terminal arborization in the targeted area, with putative functions annotated. Furthermore, we identified a subdomain connectivity network and extensive local axons within the PFC. Compared with those in mice, macaque PFC projectomes exhibited a similar topographic gradient of terminal arborization at the targeted regions but much higher target specificity, fewer collaterals, and smaller brain size-normalized arbors. Thus, whole-brain single-axon macaque projectomes revealed highly refined axon targeting and arborization, providing key insights into the structural basis for complex brain functions in primates.

Keywords: axon targeting; cognitive functions; connectome; cross-species comparison; prefrontal cortex; primate brain; single-neuron projectome; terminal arborization.

MeSH terms

  • Animals
  • Axons* / metabolism
  • Axons* / physiology
  • Female
  • Macaca
  • Macaca mulatta
  • Male
  • Mice
  • Neural Pathways / physiology
  • Neurons* / cytology
  • Neurons* / physiology
  • Prefrontal Cortex* / cytology
  • Prefrontal Cortex* / physiology