The pufferfish SLP-1 gene, a new member of the SCL/TAL-1 family of transcription factors

Genomics. 1998 Feb 15;48(1):52-62. doi: 10.1006/geno.1997.5162.

Abstract

The SCL/TAL-1 gene encodes a basic helix-loop-helix (bHLH) transcription factor essential for the development of all hemopoietic lineages and also acts as a T-cell oncogene. Four related genes have been described in mammals (LYL-1, TAL-2, NSCL1, and NSCL2), all of which exhibit a high degree of sequence similarity to SCL/TAL-1 in the bHLH domain and two of which (LYL-1 and TAL-2) have also been implicated in the pathogenesis of T-cell acute lymphoblastic leukemia. In this study we describe the identification and characterization of a pufferfish gene termed SLP-1, which represents a new member of this gene family. The genomic structure and sequence of SLP-1 suggests that it forms a subfamily with SCL/TAL-1 and LYL-1 and is most closely related to SCL/TAL-1. However, unlike SCL/TAL-1, SLP-1 is widely expressed. Sequence analysis of a whole cosmid containing SLP-1 shows that SLP-1 is flanked upstream by a zinc finger gene and a fork-head-domain gene and downstream by a heme-oxygenase and a RING finger gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Blotting, Northern
  • DNA-Binding Proteins / genetics*
  • Fish Proteins*
  • Fishes, Poisonous / genetics*
  • Gene Expression
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Proto-Oncogene Proteins*
  • Sequence Homology, Amino Acid
  • Transcription Factors / genetics*

Substances

  • DNA-Binding Proteins
  • Fish Proteins
  • Proto-Oncogene Proteins
  • SLP-1 protein, Fugu rubripes
  • Transcription Factors

Associated data

  • GENBANK/AF022814