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431 results

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Page 1
Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575).
Spring S, Lapidus A, Schröder M, Gleim D, Sims D, Meincke L, Glavina Del Rio T, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Saunders E, Brettin T, Detter JC, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Han C. Spring S, et al. Among authors: lapidus a. Stand Genomic Sci. 2009 Nov 22;1(3):242-53. doi: 10.4056/sigs.39508. Stand Genomic Sci. 2009. PMID: 21304664 Free PMC article.
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.
Ivanova N, Sorokin A, Anderson I, Galleron N, Candelon B, Kapatral V, Bhattacharyya A, Reznik G, Mikhailova N, Lapidus A, Chu L, Mazur M, Goltsman E, Larsen N, D'Souza M, Walunas T, Grechkin Y, Pusch G, Haselkorn R, Fonstein M, Ehrlich SD, Overbeek R, Kyrpides N. Ivanova N, et al. Among authors: lapidus a. Nature. 2003 May 1;423(6935):87-91. doi: 10.1038/nature01582. Nature. 2003. PMID: 12721630
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.
Feil H, Feil WS, Chain P, Larimer F, DiBartolo G, Copeland A, Lykidis A, Trong S, Nolan M, Goltsman E, Thiel J, Malfatti S, Loper JE, Lapidus A, Detter JC, Land M, Richardson PM, Kyrpides NC, Ivanova N, Lindow SE. Feil H, et al. Among authors: lapidus a. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):11064-9. doi: 10.1073/pnas.0504930102. Epub 2005 Jul 25. Proc Natl Acad Sci U S A. 2005. PMID: 16043691 Free PMC article.
The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes.
Maeder DL, Anderson I, Brettin TS, Bruce DC, Gilna P, Han CS, Lapidus A, Metcalf WW, Saunders E, Tapia R, Sowers KR. Maeder DL, et al. Among authors: lapidus a. J Bacteriol. 2006 Nov;188(22):7922-31. doi: 10.1128/JB.00810-06. Epub 2006 Sep 15. J Bacteriol. 2006. PMID: 16980466 Free PMC article.
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
Mavromatis K, Ivanova N, Barry K, Shapiro H, Goltsman E, McHardy AC, Rigoutsos I, Salamov A, Korzeniewski F, Land M, Lapidus A, Grigoriev I, Richardson P, Hugenholtz P, Kyrpides NC. Mavromatis K, et al. Among authors: lapidus a. Nat Methods. 2007 Jun;4(6):495-500. doi: 10.1038/nmeth1043. Epub 2007 Apr 29. Nat Methods. 2007. PMID: 17468765 Free article.
Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans.
Sievert SM, Scott KM, Klotz MG, Chain PS, Hauser LJ, Hemp J, Hügler M, Land M, Lapidus A, Larimer FW, Lucas S, Malfatti SA, Meyer F, Paulsen IT, Ren Q, Simon J; USF Genomics Class. Sievert SM, et al. Among authors: lapidus a. Appl Environ Microbiol. 2008 Feb;74(4):1145-56. doi: 10.1128/AEM.01844-07. Epub 2007 Dec 7. Appl Environ Microbiol. 2008. PMID: 18065616 Free PMC article.
Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction.
Anderson I, Rodriguez J, Susanti D, Porat I, Reich C, Ulrich LE, Elkins JG, Mavromatis K, Lykidis A, Kim E, Thompson LS, Nolan M, Land M, Copeland A, Lapidus A, Lucas S, Detter C, Zhulin IB, Olsen GJ, Whitman W, Mukhopadhyay B, Bristow J, Kyrpides N. Anderson I, et al. Among authors: lapidus a. J Bacteriol. 2008 Apr;190(8):2957-65. doi: 10.1128/JB.01949-07. Epub 2008 Feb 8. J Bacteriol. 2008. PMID: 18263724 Free PMC article.
High-resolution metagenomics targets specific functional types in complex microbial communities.
Kalyuzhnaya MG, Lapidus A, Ivanova N, Copeland AC, McHardy AC, Szeto E, Salamov A, Grigoriev IV, Suciu D, Levine SR, Markowitz VM, Rigoutsos I, Tringe SG, Bruce DC, Richardson PM, Lidstrom ME, Chistoserdova L. Kalyuzhnaya MG, et al. Among authors: lapidus a. Nat Biotechnol. 2008 Sep;26(9):1029-34. doi: 10.1038/nbt.1488. Nat Biotechnol. 2008. PMID: 18711340 Free article.
431 results