Stormo GD - Search Results

1

Innate host defense requires TFEB-mediated transcription of cytoprotective and antimicrobial genes.

Visvikis O, Ihuegbu N, Labed SA, Luhachack LG, Alves AF, Wollenberg AC, Stuart LM, Stormo GD, Irazoqui JE. Visvikis O, et al. Among authors: stormo gd. Immunity. 2014 Jun 19;40(6):896-909. doi: 10.1016/j.immuni.2014.05.002. Epub 2014 May 29. Immunity. 2014. PMID: 24882217 Free PMC article.

2

Fast, sensitive discovery of conserved genome-wide motifs.

Ihuegbu NE, Stormo GD, Buhler J. Ihuegbu NE, et al. Among authors: stormo gd. J Comput Biol. 2012 Feb;19(2):139-47. doi: 10.1089/cmb.2011.0249. J Comput Biol. 2012. PMID: 22300316 Free PMC article.

3

Conserved Motifs and Prediction of Regulatory Modules in Caenorhabditis elegans.

Zhao G, Ihuegbu N, Lee M, Schriefer L, Wang T, Stormo GD. Zhao G, et al. Among authors: stormo gd. G3 (Bethesda). 2012 Apr;2(4):469-81. doi: 10.1534/g3.111.001081. Epub 2012 Apr 1. G3 (Bethesda). 2012. PMID: 22540038 Free PMC article.

4

Novel transcription regulatory elements in Caenorhabditis elegans muscle genes.

GuhaThakurta D, Schriefer LA, Waterston RH, Stormo GD. GuhaThakurta D, et al. Among authors: stormo gd. Genome Res. 2004 Dec;14(12):2457-68. doi: 10.1101/gr.2961104. Genome Res. 2004. PMID: 15574824 Free PMC article.

5

Identification of muscle-specific regulatory modules in Caenorhabditis elegans.

Zhao G, Schriefer LA, Stormo GD. Zhao G, et al. Among authors: stormo gd. Genome Res. 2007 Mar;17(3):348-57. doi: 10.1101/gr.5989907. Epub 2007 Feb 6. Genome Res. 2007. PMID: 17284674 Free PMC article.

6

RNA interference of achaete-scute homolog 1 in mouse prostate neuroendocrine cells reveals its gene targets and DNA binding sites.

Hu Y, Wang T, Stormo GD, Gordon JI. Hu Y, et al. Among authors: stormo gd. Proc Natl Acad Sci U S A. 2004 Apr 13;101(15):5559-64. doi: 10.1073/pnas.0306988101. Epub 2004 Apr 1. Proc Natl Acad Sci U S A. 2004. PMID: 15060276 Free PMC article.

7

The AP-1 transcription factor Batf controls T(H)17 differentiation.

Schraml BU, Hildner K, Ise W, Lee WL, Smith WA, Solomon B, Sahota G, Sim J, Mukasa R, Cemerski S, Hatton RD, Stormo GD, Weaver CT, Russell JH, Murphy TL, Murphy KM. Schraml BU, et al. Among authors: stormo gd. Nature. 2009 Jul 16;460(7253):405-9. doi: 10.1038/nature08114. Epub 2009 Jul 5. Nature. 2009. PMID: 19578362 Free PMC article.

8

Quantitative profiling of BATF family proteins/JUNB/IRF hetero-trimers using Spec-seq.

Chang YK, Zuo Z, Stormo GD. Chang YK, et al. Among authors: stormo gd. BMC Mol Biol. 2018 Mar 27;19(1):5. doi: 10.1186/s12867-018-0106-7. BMC Mol Biol. 2018. PMID: 29587652 Free PMC article.

9

Additivity in protein-DNA interactions: how good an approximation is it?

Benos PV, Bulyk ML, Stormo GD. Benos PV, et al. Among authors: stormo gd. Nucleic Acids Res. 2002 Oct 15;30(20):4442-51. doi: 10.1093/nar/gkf578. Nucleic Acids Res. 2002. PMID: 12384591 Free PMC article.

10

A systematic model to predict transcriptional regulatory mechanisms based on overrepresentation of transcription factor binding profiles.

Chang LW, Nagarajan R, Magee JA, Milbrandt J, Stormo GD. Chang LW, et al. Among authors: stormo gd. Genome Res. 2006 Mar;16(3):405-13. doi: 10.1101/gr.4303406. Epub 2006 Jan 31. Genome Res. 2006. PMID: 16449500 Free PMC article.

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