Trevarton AJ - Search Results

1

Targeted RNAseq assay incorporating unique molecular identifiers for improved quantification of gene expression signatures and transcribed mutation fraction in fixed tumor samples.

Fu C, Marczyk M, Samuels M, Trevarton AJ, Qu J, Lau R, Du L, Pappas T, Sinn BV, Gould RE, Pusztai L, Hatzis C, Symmans WF. Fu C, et al. Among authors: trevarton aj. BMC Cancer. 2021 Feb 4;21(1):114. doi: 10.1186/s12885-021-07814-8. BMC Cancer. 2021. PMID: 33541297 Free PMC article.

2

Selection pressure on the hepatitis B virus pre-S/S and P open reading frames in Tongan subjects with a chronic hepatitis B virus infection.

Abbott WG, Tsai P, Ross HA, 'Ofanoa M, Trevarton AJ, Hornell J, Munn SR, Gane EJ. Abbott WG, et al. Among authors: trevarton aj. Antiviral Res. 2012 Nov;96(2):148-57. doi: 10.1016/j.antiviral.2012.08.007. Epub 2012 Aug 31. Antiviral Res. 2012. PMID: 22960602

3

The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.

Marczyk M, Fu C, Lau R, Du L, Trevarton AJ, Sinn BV, Gould RE, Pusztai L, Hatzis C, Symmans WF. Marczyk M, et al. Among authors: trevarton aj. BMC Cancer. 2019 Dec 5;19(1):1189. doi: 10.1186/s12885-019-6363-0. BMC Cancer. 2019. PMID: 31805884 Free PMC article.

4

Simple combination of multiple somatic variant callers to increase accuracy.

Trevarton AJ, Chang JT, Symmans WF. Trevarton AJ, et al. Sci Rep. 2023 May 25;13(1):8463. doi: 10.1038/s41598-023-34925-y. Sci Rep. 2023. PMID: 37231022 Free PMC article.

5

Comparative analysis of Ficoll-Hypaque and CytoLyt techniques for blood removal in breast cancer malignant effusions: effects on RNA quality and sequencing outcomes.

Sura GH, Tran K, Trevarton AJ, Marczyk M, Fu C, Du L, Qu J, Lau R, Tasto A, Gould RE, Tinnirello A, Sinn BV, Pusztai L, Hatzis C, Symmans WF. Sura GH, et al. Among authors: trevarton aj. J Am Soc Cytopathol. 2025 Mar-Apr;14(2):91-101. doi: 10.1016/j.jasc.2024.11.001. Epub 2024 Nov 15. J Am Soc Cytopathol. 2025. PMID: 39668068

6

MelanomaDB: A Web Tool for Integrative Analysis of Melanoma Genomic Information to Identify Disease-Associated Molecular Pathways.

Trevarton AJ, Mann MB, Knapp C, Araki H, Wren JD, Stones-Havas S, Black MA, Print CG. Trevarton AJ, et al. Front Oncol. 2013 Jul 16;3:184. doi: 10.3389/fonc.2013.00184. eCollection 2013. Front Oncol. 2013. PMID: 23875173 Free PMC article.

7

Comparison of genomic prediction accuracies in dairy cattle lactation traits using five classes of functional variants versus generic SNP.

Alemu SW, Lopdell TJ, Trevarton AJ, Snell RG, Littlejohn MD, Garrick DJ. Alemu SW, et al. Among authors: trevarton aj. Genet Sel Evol. 2025 Apr 11;57(1):20. doi: 10.1186/s12711-025-00966-2. Genet Sel Evol. 2025. PMID: 40217496 Free PMC article.

8

A common regulatory haplotype doubles lactoferrin concentration in milk.

Lopdell TJ, Trevarton AJ, Moody J, Prowse-Wilkins C, Knowles S, Tiplady K, Chamberlain AJ, Goddard ME, Spelman RJ, Lehnert K, Snell RG, Davis SR, Littlejohn MD. Lopdell TJ, et al. Among authors: trevarton aj. Genet Sel Evol. 2024 Mar 28;56(1):22. doi: 10.1186/s12711-024-00890-x. Genet Sel Evol. 2024. PMID: 38549172 Free PMC article.

9

Successful editing and maintenance of lactogenic gene expression in primary bovine mammary epithelial cells.

Moody J, Mears E, Trevarton AJ, Broadhurst M, Molenaar A, Chometon T, Lopdell T, Littlejohn M, Snell R. Moody J, et al. Among authors: trevarton aj. In Vitro Cell Dev Biol Anim. 2023 May;59(5):316-330. doi: 10.1007/s11626-023-00762-6. Epub 2023 Jun 6. In Vitro Cell Dev Biol Anim. 2023. PMID: 37278965 Free PMC article.

10

Development of SpCas9-expressing bovine mammary epithelial cell lines.

Trevarton AJ, Mears ER, Moody J, Lopdell TJ, Chometon TQ, Taylor JA, Wang CJ, Littlejohn MD, Snell RG. Trevarton AJ, et al. In Vitro Cell Dev Biol Anim. 2023 Mar;59(3):163-165. doi: 10.1007/s11626-023-00756-4. Epub 2023 Mar 17. In Vitro Cell Dev Biol Anim. 2023. PMID: 36930414 No abstract available.

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