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Page 1
COVID-19 Prediction using Genomic Footprint of SARS-CoV-2 in Air, Surface Swab and Wastewater Samples.
Solo-Gabriele HM, Kumar S, Abelson S, Penso J, Contreras J, Babler KM, Sharkey ME, Mantero AMA, Lamar WE, Tallon JJ Jr, Kobetz E, Solle NS, Shukla BS, Kenney RJ, Mason CE, Schürer SC, Vidovic D, Williams SL, Grills GS, Jayaweera DT, Mirsaeidi M, Kumar N. Solo-Gabriele HM, et al. Among authors: shukla bs. medRxiv [Preprint]. 2022 Apr 1:2022.03.14.22272314. doi: 10.1101/2022.03.14.22272314. medRxiv. 2022. Update in: Sci Total Environ. 2023 Jan 20;857(Pt 1):159188. doi: 10.1016/j.scitotenv.2022.159188. PMID: 35313580 Free PMC article. Updated. Preprint.
Geospatially-resolved public-health surveillance via wastewater sequencing.
Tierney BT, Foox J, Ryon KA, Butler D, Damle N, Young BG, Mozsary C, Babler KM, Yin X, Carattini Y, Andrews D, Solle NS, Kumar N, Shukla B, Vidovic D, Currall B, Williams SL, Schürer SC, Stevenson M, Amirali A, Beaver CC, Kobetz E, Boone MM, Reding B, Laine J, Comerford S, Lamar WE, Tallon JJ, Hirschberg JW, Proszynski J, Sharkey ME, Church GM, Grills GS, Solo-Gabriele HM, Mason CE. Tierney BT, et al. medRxiv [Preprint]. 2023 Jun 1:2023.05.31.23290781. doi: 10.1101/2023.05.31.23290781. medRxiv. 2023. Update in: Nat Commun. 2024 Sep 27;15(1):8386. doi: 10.1038/s41467-024-52427-x. PMID: 37398062 Free PMC article. Updated. Preprint.
Wastewater based surveillance can be used to reduce clinical testing intensity on a university campus.
Amirali A, Babler KM, Sharkey ME, Beaver CC, Boone MM, Comerford S, Cooper D, Currall BB, Goodman KW, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Mason CE, Reding BD, Roca MA, Ryon K, Schürer SC, Shukla BS, Solle NS, Stevenson M, Tallon JJ Jr, Vidović D, Williams SL, Yin X, Solo-Gabriele HM. Amirali A, et al. Among authors: shukla bs. Sci Total Environ. 2024 Mar 25;918:170452. doi: 10.1016/j.scitotenv.2024.170452. Epub 2024 Jan 29. Sci Total Environ. 2024. PMID: 38296085 Free PMC article.
Correlative analysis of wastewater trends with clinical cases and hospitalizations through five dominant variant waves of COVID-19.
Zhan Q, Solo-Gabriele HM, Sharkey ME, Amirali A, Beaver CC, Boone MM, Comerford S, Cooper D, Cortizas EM, Cosculluela GA, Currall BB, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Lyu J, Mason CE, Reding BD, Roca MA, Schürer SC, Shukla BS, Solle NS, Suarez MM, Stevenson M, Tallon JJ Jr, Thomas C, Vidović D, Williams SL, Yin X, Zarnegarnia Y, Babler KM. Zhan Q, et al. Among authors: shukla bs. ACS ES T Water. 2023 Sep 8;3(9):2849-2862. doi: 10.1021/acsestwater.3c00032. Epub 2023 Aug 22. ACS ES T Water. 2023. PMID: 38487696 Free PMC article.
Factors Associated With Poor Clinical and Microbiologic Outcomes in Candida auris Bloodstream Infection: A Multicenter Retrospective Cohort Study.
Jimenez A, Rosa R, Ayoub S, Guran R, Arenas S, Valencia N, Stabile JC, Estepa AT, Parekh DJ, Ferreira T, Gershengorn HB, Prabaker KK, Eckardt PA, Zahn M, Abbo LM, Shukla BS. Jimenez A, et al. Among authors: shukla bs. Clin Infect Dis. 2024 Nov 22;79(5):1262-1268. doi: 10.1093/cid/ciae411. Clin Infect Dis. 2024. PMID: 39136254
Monkeypox viral nucleic acids detected using both DNA and RNA extraction workflows.
Sharkey ME, Babler KM, Shukla BS, Abelson SM, Alsuliman B, Amirali A, Comerford S, Grills GS, Kumar N, Laine J, Lee J, Lamar WE, Mason CE, Penso J, Reding BD, Schürer SC, Stevenson M, Vidović D, Solo-Gabriele HM. Sharkey ME, et al. Among authors: shukla bs. Sci Total Environ. 2023 Sep 10;890:164289. doi: 10.1016/j.scitotenv.2023.164289. Epub 2023 May 20. Sci Total Environ. 2023. PMID: 37216988 Free PMC article.
Relationships between SARS-CoV-2 in Wastewater and COVID-19 Clinical Cases and Hospitalizations, with and without Normalization against Indicators of Human Waste.
Zhan Q, Babler KM, Sharkey ME, Amirali A, Beaver CC, Boone MM, Comerford S, Cooper D, Cortizas EM, Currall BB, Foox J, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Mantero AMA, Mason CE, Reding BD, Robertson M, Roca MA, Ryon K, Schürer SC, Shukla BS, Solle NS, Stevenson M, Tallon JJ Jr, Thomas C, Thomas T, Vidović D, Williams SL, Yin X, Solo-Gabriele HM. Zhan Q, et al. Among authors: shukla bs. ACS ES T Water. 2022 Nov 11;2(11):1992-2003. doi: 10.1021/acsestwater.2c00045. Epub 2022 May 26. ACS ES T Water. 2022. PMID: 36398131 Free PMC article.
Predicting COVID-19 cases using SARS-CoV-2 RNA in air, surface swab and wastewater samples.
Solo-Gabriele HM, Kumar S, Abelson S, Penso J, Contreras J, Babler KM, Sharkey ME, Mantero AMA, Lamar WE, Tallon JJ Jr, Kobetz E, Solle NS, Shukla BS, Kenney RJ, Mason CE, Schürer SC, Vidovic D, Williams SL, Grills GS, Jayaweera DT, Mirsaeidi M, Kumar N. Solo-Gabriele HM, et al. Among authors: shukla bs. Sci Total Environ. 2023 Jan 20;857(Pt 1):159188. doi: 10.1016/j.scitotenv.2022.159188. Epub 2022 Oct 4. Sci Total Environ. 2023. PMID: 36202365 Free PMC article.
20 results