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BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysis.
NAR Genom Bioinform. 2023 Jan 20;5(1):lqad004. doi: 10.1093/nargab/lqad004. eCollection 2023 Mar.
NAR Genom Bioinform. 2023.
PMID: 36685727
Free PMC article.
SneakySnake: a fast and accurate universal genome pre-alignment filter for CPUs, GPUs and FPGAs.
Alser M, Shahroodi T, Gómez-Luna J, Alkan C, Mutlu O.
Alser M, et al. Among authors: shahroodi t.
Bioinformatics. 2021 Apr 1;36(22-23):5282-5290. doi: 10.1093/bioinformatics/btaa1015.
Bioinformatics. 2021.
PMID: 33315064
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