Doherty JA - Search Results

1

Improving Precision of Do Not Contact Codes: Results of a Manual Review to Inform Coding and Case Contact Procedures.

Lawson-Michod KA, Carter M, Yoder V, McCarty RD, Bateman C, Millar MM, Doherty JA. Lawson-Michod KA, et al. Among authors: doherty ja. J Registry Manag. 2022 Winter;49(4):126-131. J Registry Manag. 2022. PMID: 37260812 Free PMC article. Review.

2

Automatic information extraction from childhood cancer pathology reports.

Yoon HJ, Peluso A, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Coyle L, Penberthy L. Yoon HJ, et al. JAMIA Open. 2022 Jun 16;5(2):ooac049. doi: 10.1093/jamiaopen/ooac049. eCollection 2022 Jul. JAMIA Open. 2022. PMID: 35721398 Free PMC article.

3

Class imbalance in out-of-distribution datasets: Improving the robustness of the TextCNN for the classification of rare cancer types.

De Angeli K, Gao S, Danciu I, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Damesyn M, Coyle L, Penberthy L, Tourassi GD, Yoon HJ. De Angeli K, et al. J Biomed Inform. 2022 Jan;125:103957. doi: 10.1016/j.jbi.2021.103957. Epub 2021 Nov 22. J Biomed Inform. 2022. PMID: 34823030 Free PMC article.

4

Development of message passing-based graph convolutional networks for classifying cancer pathology reports.

Yoon HJ, Klasky HB, Blanchard AE, Christian JB, Durbin EB, Wu XC, Stroup A, Doherty J, Coyle L, Penberthy L, Tourassi GD. Yoon HJ, et al. BMC Med Inform Decis Mak. 2024 Sep 17;24(Suppl 5):262. doi: 10.1186/s12911-024-02662-5. BMC Med Inform Decis Mak. 2024. PMID: 39289714 Free PMC article.

5

Building a tobacco user registry by extracting multiple smoking behaviors from clinical notes.

Palmer EL, Hassanpour S, Higgins J, Doherty JA, Onega T. Palmer EL, et al. Among authors: doherty ja. BMC Med Inform Decis Mak. 2019 Jul 25;19(1):141. doi: 10.1186/s12911-019-0863-3. BMC Med Inform Decis Mak. 2019. PMID: 31340796 Free PMC article.

6

Assessing data availability and quality within an electronic health record system through external validation against an external clinical data source.

Palmer EL, Higgins J, Hassanpour S, Sargent J, Robinson CM, Doherty JA, Onega T. Palmer EL, et al. Among authors: doherty ja. BMC Med Inform Decis Mak. 2019 Jul 25;19(1):143. doi: 10.1186/s12911-019-0864-2. BMC Med Inform Decis Mak. 2019. PMID: 31345210 Free PMC article.

7

Deep learning uncertainty quantification for clinical text classification.

Peluso A, Danciu I, Yoon HJ, Yusof JM, Bhattacharya T, Spannaus A, Schaefferkoetter N, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Coyle L, Penberthy L, Tourassi GD, Gao S. Peluso A, et al. J Biomed Inform. 2024 Jan;149:104576. doi: 10.1016/j.jbi.2023.104576. Epub 2023 Dec 13. J Biomed Inform. 2024. PMID: 38101690 Free PMC article.

8

Optimal vocabulary selection approaches for privacy-preserving deep NLP model training for information extraction and cancer epidemiology.

Yoon HJ, Stanley C, Christian JB, Klasky HB, Blanchard AE, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz SM, Wiggins C, Damesyn M, Coyle L, Tourassi GD. Yoon HJ, et al. Cancer Biomark. 2022;33(2):185-198. doi: 10.3233/CBM-210306. Cancer Biomark. 2022. PMID: 35213361 Free PMC article.

9

Using ensembles and distillation to optimize the deployment of deep learning models for the classification of electronic cancer pathology reports.

De Angeli K, Gao S, Blanchard A, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz SM, Wiggins C, Coyle L, Penberthy L, Tourassi G, Yoon HJ. De Angeli K, et al. JAMIA Open. 2022 Sep 13;5(3):ooac075. doi: 10.1093/jamiaopen/ooac075. eCollection 2022 Oct. JAMIA Open. 2022. PMID: 36110150 Free PMC article.

10

Deep active learning for classifying cancer pathology reports.

De Angeli K, Gao S, Alawad M, Yoon HJ, Schaefferkoetter N, Wu XC, Durbin EB, Doherty J, Stroup A, Coyle L, Penberthy L, Tourassi G. De Angeli K, et al. BMC Bioinformatics. 2021 Mar 9;22(1):113. doi: 10.1186/s12859-021-04047-1. BMC Bioinformatics. 2021. PMID: 33750288 Free PMC article.

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