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A systematic search for RNA structural switches across the human transcriptome.
Khoroshkin M, Asarnow D, Zhou S, Navickas A, Winters A, Goudreau J, Zhou SK, Yu J, Palka C, Fish L, Borah A, Yousefi K, Carpenter C, Ansel KM, Cheng Y, Gilbert LA, Goodarzi H. Khoroshkin M, et al. Among authors: winters a. Nat Methods. 2024 Sep;21(9):1634-1645. doi: 10.1038/s41592-024-02335-1. Epub 2024 Jul 16. Nat Methods. 2024. PMID: 39014073 Free PMC article.
Genome-wide CRISPR screens identify PTGES3 as a novel AR modulator.
Li H, Melnyk JE, Fu BXH, Shrestha R, Zhang M, Sjöström M, Feng S, Anderson JA, Han W, Chesner LN, Shin HJ, Farsh T, Suarez HJ, Nath S, Chou J, Das R, Egusa EA, Zhu J, Winters A, Maheshwari A, Hua JT, Alshalalfa M, Chen WS, Calvert M, Davicioni E, Kishishita A, Barpanda A, Liu T, Wiita AP, Stohr BA, Siddiqui J, Huang B, Small EJ, Shokat KM, Nelson P, Quigley DA, Wasmuth EV, Gilbert LA, Feng FY. Li H, et al. Among authors: winters a. bioRxiv [Preprint]. 2025 May 31:2025.05.29.656244. doi: 10.1101/2025.05.29.656244. bioRxiv. 2025. PMID: 40501535 Free PMC article. Preprint.
Alignment-free viral sequence classification at scale.
van Zyl DJ, Dunaiski M, Tegally H, Baxter C, de Oliveira T, Xavier JS; INFORM Africa research study group. van Zyl DJ, et al. BMC Genomics. 2025 Apr 18;26(1):389. doi: 10.1186/s12864-025-11554-5. BMC Genomics. 2025. PMID: 40251515 Free PMC article.
392 results