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Page 1
Multiscale mapping of transcriptomic signatures for cardiotoxic drugs.
Hansen J, Xiong Y, Siddiq MM, Dhanan P, Hu B, Shewale B, Yadaw AS, Jayaraman G, Tolentino RE, Chen Y, Martinez P, Beaumont KG, Sebra R, Vidovic D, Schürer SC, Goldfarb J, Gallo JM, Birtwistle MR, Sobie EA, Azeloglu EU, Berger SI, Chan A, Schaniel C, Dubois NC, Iyengar R. Hansen J, et al. Among authors: schurer sc. Nat Commun. 2024 Sep 11;15(1):7968. doi: 10.1038/s41467-024-52145-4. Nat Commun. 2024. PMID: 39261481 Free PMC article.
MorPhiC Consortium: towards functional characterization of all human genes.
Adli M, Przybyla L, Burdett T, Burridge PW, Cacheiro P, Chang HY, Engreitz JM, Gilbert LA, Greenleaf WJ, Hsu L, Huangfu D, Hung LH, Kundaje A, Li S, Parkinson H, Qiu X, Robson P, Schürer SC, Shojaie A, Skarnes WC, Smedley D, Studer L, Sun W, Vidović D, Vierbuchen T, White BS, Yeung KY, Yue F, Zhou T; MorPhiC Consortium. Adli M, et al. Among authors: schurer sc. Nature. 2025 Feb;638(8050):351-359. doi: 10.1038/s41586-024-08243-w. Epub 2025 Feb 12. Nature. 2025. PMID: 39939790 Free PMC article.
Comprehensive proteomics metadata and integrative web portals facilitate sharing and integration of LINCS multiomics data.
Vidović D, Shamsaei B, Schürer SC, Kogan P, Chojnacki S, Kouril M, Medvedovic M, Niu W, Azeloglu EU, Birtwistle MR, Chen Y, Chen T, Hansen J, Hu B, Iyengar R, Jayaraman G, Li H, Liu T, Sobie EA, Xiong Y, Berberich MJ, Bradshaw G, Chung M, Everley RA, Gaudio B, Hafner M, Kalocsay M, Mills CE, Nariya MK, Sorger PK, Subramanian K, Victor C, Banuelos M, Dardov V, Holewinski R, Manalo DM, Mandefro B, Matlock AD, Ornelas L, Sareen D, Svendsen CN, Vaibhav V, Van Eyk JE, Venkatraman V, Finkbiener S, Fraenkel E, Rothstein J, Thompson L, Asiedu J, Carr SA, Christianson KE, Davison D, Dele-Oni DO, DeRuff KC, Egri SB, Jacome ASV, Jaffe JD, Lam D, Litichevskiy L, Lu X, Mullahoo J, Officer A, Papanastasiou M, Peckner R, Toder C, Blanchard J, Bula M, Ko T, Tsai LH, Young JZ, Sharma V, Pillai A, Meller J, MacCoss MJ. Vidović D, et al. Among authors: schurer sc. Mol Cell Proteomics. 2025 Mar 13:100947. doi: 10.1016/j.mcpro.2025.100947. Online ahead of print. Mol Cell Proteomics. 2025. PMID: 40089066 Free article.
COVID-19 Prediction using Genomic Footprint of SARS-CoV-2 in Air, Surface Swab and Wastewater Samples.
Solo-Gabriele HM, Kumar S, Abelson S, Penso J, Contreras J, Babler KM, Sharkey ME, Mantero AMA, Lamar WE, Tallon JJ Jr, Kobetz E, Solle NS, Shukla BS, Kenney RJ, Mason CE, Schürer SC, Vidovic D, Williams SL, Grills GS, Jayaweera DT, Mirsaeidi M, Kumar N. Solo-Gabriele HM, et al. Among authors: schurer sc. medRxiv [Preprint]. 2022 Apr 1:2022.03.14.22272314. doi: 10.1101/2022.03.14.22272314. medRxiv. 2022. Update in: Sci Total Environ. 2023 Jan 20;857(Pt 1):159188. doi: 10.1016/j.scitotenv.2022.159188. PMID: 35313580 Free PMC article. Updated. Preprint.
Expanding a Wastewater-Based Surveillance Methodology for DNA Isolation from a Workflow Optimized for SARS-CoV-2 RNA Quantification.
Babler KM, Sharkey ME, Amirali A, Boone MM, Comerford S, Currall BB, Grills GS, Laine J, Mason CE, Reding B, Schürer S, Stevenson M, Vidović D, Williams SL, Solo-Gabriele HM. Babler KM, et al. J Biomol Tech. 2023 Dec 20;34(4):3fc1f5fe.dfa8d906. doi: 10.7171/3fc1f5fe.dfa8d906. eCollection 2023 Dec. J Biomol Tech. 2023. PMID: 38268997 Free PMC article.
Wastewater based surveillance can be used to reduce clinical testing intensity on a university campus.
Amirali A, Babler KM, Sharkey ME, Beaver CC, Boone MM, Comerford S, Cooper D, Currall BB, Goodman KW, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Mason CE, Reding BD, Roca MA, Ryon K, Schürer SC, Shukla BS, Solle NS, Stevenson M, Tallon JJ Jr, Vidović D, Williams SL, Yin X, Solo-Gabriele HM. Amirali A, et al. Among authors: schurer sc. Sci Total Environ. 2024 Mar 25;918:170452. doi: 10.1016/j.scitotenv.2024.170452. Epub 2024 Jan 29. Sci Total Environ. 2024. PMID: 38296085 Free PMC article.
Correlative analysis of wastewater trends with clinical cases and hospitalizations through five dominant variant waves of COVID-19.
Zhan Q, Solo-Gabriele HM, Sharkey ME, Amirali A, Beaver CC, Boone MM, Comerford S, Cooper D, Cortizas EM, Cosculluela GA, Currall BB, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Lyu J, Mason CE, Reding BD, Roca MA, Schürer SC, Shukla BS, Solle NS, Suarez MM, Stevenson M, Tallon JJ Jr, Thomas C, Vidović D, Williams SL, Yin X, Zarnegarnia Y, Babler KM. Zhan Q, et al. Among authors: schurer sc. ACS ES T Water. 2023 Sep 8;3(9):2849-2862. doi: 10.1021/acsestwater.3c00032. Epub 2023 Aug 22. ACS ES T Water. 2023. PMID: 38487696 Free PMC article.
DRUG AND SINGLE-CELL GENE EXPRESSION INTEGRATION IDENTIFIES SENSITIVE AND RESISTANT GLIOBLASTOMA CELL POPULATIONS.
Suter RK, Jermakowicz AM, Veeramachaneni R, D'Antuono M, Zhang L, Chowdary R, Kaeppeli S, Sharp M, Palwai P, Stathias V, Baker G, Ruiz L, Walters W, Cepero M, Burgenske D, Reilly EB, Oleksijew A, Anderson MG, Williams SL, Ivan ME, Komotar RJ, De La Fuente MI, Stein G, Wojcinski A, Kesari S, Sarkaria JN, Schürer SC, Ayad NG. Suter RK, et al. Among authors: schurer sc. bioRxiv [Preprint]. 2025 May 15:2025.05.15.654044. doi: 10.1101/2025.05.15.654044. bioRxiv. 2025. PMID: 40462892 Free PMC article. Preprint.
Geospatially-resolved public-health surveillance via wastewater sequencing.
Tierney BT, Foox J, Ryon KA, Butler D, Damle N, Young BG, Mozsary C, Babler KM, Yin X, Carattini Y, Andrews D, Solle NS, Kumar N, Shukla B, Vidovic D, Currall B, Williams SL, Schürer SC, Stevenson M, Amirali A, Beaver CC, Kobetz E, Boone MM, Reding B, Laine J, Comerford S, Lamar WE, Tallon JJ, Hirschberg JW, Proszynski J, Sharkey ME, Church GM, Grills GS, Solo-Gabriele HM, Mason CE. Tierney BT, et al. Among authors: schurer sc. medRxiv [Preprint]. 2023 Jun 1:2023.05.31.23290781. doi: 10.1101/2023.05.31.23290781. medRxiv. 2023. Update in: Nat Commun. 2024 Sep 27;15(1):8386. doi: 10.1038/s41467-024-52427-x. PMID: 37398062 Free PMC article. Updated. Preprint.
99 results