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Characterization and bioinformatic filtering of ambient gRNAs in single-cell CRISPR screens using CLEANSER.
Liu S, Hamilton MC, Cowart T, Barrera A, Bounds LR, Nelson AC, Doty RW, Allen AS, Crawford GE, Majoros WH, Gersbach CA. Liu S, et al. Among authors: allen as. bioRxiv [Preprint]. 2024 Sep 4:2024.09.04.611293. doi: 10.1101/2024.09.04.611293. bioRxiv. 2024. Update in: Cell Genom. 2025 Feb 12;5(2):100766. doi: 10.1016/j.xgen.2025.100766. PMID: 39282389 Free PMC article. Updated. Preprint.
Promoter Deletion Leading to Allele Specific Expression in a Genetically Unsolved Case of Primary Ciliary Dyskinesia.
Beaman MM, Yin W, Smith AJ, Sears PR, Leigh MW, Ferkol TW, Kearney B, Olivier KN, Kimple AJ, Clarke S, Huggins E, Nading E, Jung SH, Iyengar AK, Zou X, Dang H, Barrera A, Majoros WH, Rehder CW, Reddy TE, Ostrowski LE, Allen AS, Knowles MR, Zariwala MA, Crawford GE. Beaman MM, et al. Among authors: allen as. Am J Med Genet A. 2025 Feb;197(2):e63880. doi: 10.1002/ajmg.a.63880. Epub 2024 Oct 4. Am J Med Genet A. 2025. PMID: 39364610
Cell Modeling and Rescue of a Novel Non-coding Genetic Cause of Glycogen Storage Disease IX.
Iyengar AK, Zou X, Dai J, Francis RA, Safi A, Patterson K, Koch RL, Clarke S, Beaman MM, Chong JX, Bamshad MJ, Majoros WH, Rehder RC, Bali DS, Allen AS, Crawford GE, Kishnani PS, Reddy TE. Iyengar AK, et al. Among authors: allen as. bioRxiv [Preprint]. 2025 May 17:2025.05.14.654043. doi: 10.1101/2025.05.14.654043. bioRxiv. 2025. PMID: 40462889 Free PMC article. Preprint.
Transcriptional and epigenetic regulators of human CD8+ T cell function identified through orthogonal CRISPR screens.
McCutcheon SR, Swartz AM, Brown MC, Barrera A, McRoberts Amador C, Siklenka K, Humayun L, Ter Weele MA, Isaacs JM, Reddy TE, Allen AS, Nair SK, Antonia SJ, Gersbach CA. McCutcheon SR, et al. Among authors: allen as. Nat Genet. 2023 Dec;55(12):2211-2223. doi: 10.1038/s41588-023-01554-0. Epub 2023 Nov 9. Nat Genet. 2023. PMID: 37945901 Free PMC article.
141 results