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Absent preoperative non-small cell lung cancer confirmation and relevant stage migration in the era before neoadjuvant chemoimmunotherapy: implications for treatment decisions in resectable non-small cell lung cancer.
van den Heuvel GRM, Mandos BLR, Schuurbiers OCJ, Ciompi F, Aarntzen E, Azijli K, Walraven I, Smit HJM, van den Heuvel MM. van den Heuvel GRM, et al. Among authors: ciompi f. Transl Lung Cancer Res. 2025 May 30;14(5):1543-1557. doi: 10.21037/tlcr-2024-1120. Epub 2025 May 22. Transl Lung Cancer Res. 2025. PMID: 40535091 Free PMC article.
Generating dermatopathology reports from gigapixel whole slide images with HistoGPT.
Tran M, Schmidle P, Guo RR, Wagner SJ, Koch V, Lupperger V, Novotny B, Murphree DH, Hardway HD, D'Amato M, Lefkes J, Geijs DJ, Feuchtinger A, Böhner A, Kaczmarczyk R, Biedermann T, Amir AL, Mooyaart AL, Ciompi F, Litjens G, Wang C, Comfere NI, Eyerich K, Braun SA, Marr C, Peng T. Tran M, et al. Among authors: ciompi f. Nat Commun. 2025 May 27;16(1):4886. doi: 10.1038/s41467-025-60014-x. Nat Commun. 2025. PMID: 40419470 Free PMC article.
The DRAGON benchmark for clinical NLP.
Bosma JS, Dercksen K, Builtjes L, André R, Roest C, Fransen SJ, Noordman CR, Navarro-Padilla M, Lefkes J, Alves N, de Grauw MJJ, van Eekelen L, Spronck JMA, Schuurmans M, de Wilde B, Hendrix W, Aswolinskiy W, Saha A, Twilt JJ, Geijs D, Veltman J, Yakar D, de Rooij M, Ciompi F, Hering A, Geerdink J, Huisman H; DRAGON consortium. Bosma JS, et al. Among authors: ciompi f. NPJ Digit Med. 2025 May 17;8(1):289. doi: 10.1038/s41746-025-01626-x. NPJ Digit Med. 2025. PMID: 40379835 Free PMC article.
Tumor budding and poorly differentiated clusters as a biological continuum in colorectal cancer invasion and prognosis.
Haddad TS, Bokhorst JM, van den Dobbelsteen L, Öztürk SK, Baumann E, van Vliet S, Verrijp K, Jamieson NB, Wood C, Berger MD, Kirsch R, Aben M, Rutgers N, Ueno H, Ciompi F, Simmer F, van der Laak J, Lugli A, Zlobec I, Nagtegaal I. Haddad TS, et al. Among authors: ciompi f. Sci Rep. 2025 May 15;15(1):16944. doi: 10.1038/s41598-025-00866-x. Sci Rep. 2025. PMID: 40374662 Free PMC article.
Scaling data toward pan-cancer foundation models.
Khalili N, Ciompi F. Khalili N, et al. Among authors: ciompi f. Trends Cancer. 2024 Oct;10(10):871-872. doi: 10.1016/j.trecan.2024.08.008. Epub 2024 Sep 11. Trends Cancer. 2024. PMID: 39266446 Free article.
87 results